Yes, there is JScript.NET, its compiler is bundled with the framework alongside C# and VB although personally I haven't used it beyond looking at examples for it.
The documentation does not have many examples for using JScript.NET, and I'm not even sure whether or not it is flexible enough to make, say, a Windows Forms application. But it may well be flexible enough to write ASP.NET with. As far as I know, none of the regulars on this forum uses it.
If you are used to programming with JScript, it may well be the case that your skills would best be transferred to C#.